This directory contains reciprocal-best netted chains for mm39-petMar3. - mm39.petMar3.rbest.net.gz: mm39-referenced recip.best net to petMar3. - mm39.petMar3.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from mm39 to petMar3 through the recip.best net. - petMar3.mm39.rbest.net.gz: petMar3-referenced recip.best net. - petMar3.mm39.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/*.mm39.petMar3.net.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - axtRBestNet/ 2021-03-15 15:44 - md5sum.txt 2020-11-24 23:05 244 mm39.petMar3.rbest.chain.gz 2020-11-24 23:05 1.7M mm39.petMar3.rbest.net.gz 2020-11-24 23:05 2.6M petMar3.mm39.rbest.chain.gz 2020-11-24 23:05 1.7M petMar3.mm39.rbest.net.gz 2020-11-24 23:05 2.7M