This directory contains reciprocal-best netted chains for mm39-hg38. - mm39.hg38.rbest.net.gz: mm39-referenced recip.best net to hg38. - mm39.hg38.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from mm39 to hg38 through the recip.best net. - hg38.mm39.rbest.net.gz: hg38-referenced recip.best net. - hg38.mm39.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/*.mm39.hg38.net.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - axtRBestNet/ 2020-10-07 15:50 - hg38.mm39.rbest.chain.gz 2020-08-18 10:56 65M hg38.mm39.rbest.net.gz 2020-08-18 10:55 141M md5sum.txt 2020-08-18 10:58 232 mm39.hg38.rbest.chain.gz 2020-08-18 10:57 65M mm39.hg38.rbest.net.gz 2020-08-18 10:58 92M