This directory contains reciprocal-best netted chains for mm10-dipOrd2.

 - mm10.dipOrd2.rbest.net.gz: mm10-referenced recip.best net to dipOrd2.
 - mm10.dipOrd2.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from mm10 to dipOrd2 through the recip.best net.

 - dipOrd2.mm10.rbest.net.gz: dipOrd2-referenced recip.best net.
 - dipOrd2.mm10.rbest.chain.gz: recip.best "liftOver" chains.

 - axtRBestNet/*.mm10.dipOrd2.net.axt.gz reciprocal best alignments in
   AXT format

See also, description of AXT format::
    http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
    http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
    http://genome.ucsc.edu/goldenPath/help/net.html

      Name                        Last modified      Size  Description
      Parent Directory                                 -   
      axtRBestNet/                2018-01-02 03:13    -   
      md5sum.txt                  2018-01-01 20:07  244   
      mm10.dipOrd2.rbest.net.gz   2018-01-01 20:07   86M  
      mm10.dipOrd2.rbest.chain.gz 2018-01-01 20:05   48M  
      dipOrd2.mm10.rbest.chain.gz 2018-01-01 20:04   48M  
      dipOrd2.mm10.rbest.net.gz   2018-01-01 20:03   89M