This directory contains reciprocal-best netted chains for hg38-otoGar3.

 - hg38.otoGar3.rbest.net.gz: hg38-referenced recip.best net to otoGar3.
 - hg38.otoGar3.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from hg38 to otoGar3 through the recip.best net.

 - otoGar3.hg38.rbest.net.gz: otoGar3-referenced recip.best net.
 - otoGar3.hg38.rbest.chain.gz: recip.best "liftOver" chains.

 - directory axtRBestNet/ - reciprocal best alignments in axt file format
   http://genome.ucsc.edu/goldenPath/help/axt.html

      Name                        Last modified      Size  Description
      Parent Directory                                 -   
      otoGar3.hg38.rbest.net.gz   2015-02-23 09:54  124M  
      otoGar3.hg38.rbest.chain.gz 2015-02-23 09:56   80M  
      md5sum.txt                  2015-02-23 09:59  244   
      hg38.otoGar3.rbest.net.gz   2015-02-23 09:59  158M  
      hg38.otoGar3.rbest.chain.gz 2015-02-23 09:57   80M  
      axtRBestNet/                2015-02-23 10:50    -