This directory contains reciprocal-best netted chains for hg38-equCab2.

 - hg38.equCab2.rbest.net.gz: hg38-referenced recip.best net to equCab2.
 - hg38.equCab2.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from hg38 to equCab2 through the recip.best net.

 - equCab2.hg38.rbest.net.gz: equCab2-referenced recip.best net.
 - equCab2.hg38.rbest.chain.gz: recip.best "liftOver" chains.

 - directory axtRBestNet/ - reciprocal best alignments in axt file format
   http://genome.ucsc.edu/goldenPath/help/axt.html

      Name                        Last modified      Size  Description
      Parent Directory                                 -   
      axtRBestNet/                2015-04-13 23:22    -   
      equCab2.hg38.rbest.chain.gz 2015-04-13 22:42   77M  
      equCab2.hg38.rbest.net.gz   2015-04-13 22:41  130M  
      hg38.equCab2.rbest.chain.gz 2015-04-13 22:43   77M  
      hg38.equCab2.rbest.net.gz   2015-04-13 22:45  137M  
      md5sum.txt                  2015-04-13 22:45  244