This directory contains a dump of the UCSC genome annotation database for the
Dec. 2013 (GRCh38/hg38) assembly of the human genome
(hg38, GRCh38 Genome Reference Consortium Human Reference 38 (GCA_000001405.15)) .
The annotations were generated by UCSC and collaborators worldwide.
For more information about this assembly, please note the NCBI resources:
http://www.ncbi.nlm.nih.gov/genome/51
http://www.ncbi.nlm.nih.gov/genome/assembly/883148
http://www.ncbi.nlm.nih.gov/bioproject/31257
Files included in this directory (updated nightly):
- *.sql files: the MySQL commands used to create the tables
- *.txt.gz files: the database tables in a tab-delimited format
compressed with gzip.
To see descriptions of the tables underlying Genome Browser annotation
tracks, select the table in the Table Browser:
http://genome.ucsc.edu/cgi-bin/hgTables?db=hg38
and click the "describe table schema" button. There is also a "view
table schema" link on the configuration page for each track.
---------------------------------------------------------------
If you plan to download a large file or multiple files from this
directory, we recommend you use ftp rather than downloading the files
via our website. To do so, ftp to hgdownload.cse.ucsc.edu, then go to
the directory goldenPath/hg38/database/. To download multiple
files, use the "mget" command:
mget <filename1> <filename2> ...
- or -
mget -a (to download all the files in the directory)
Alternate methods to ftp access.
Using an rsync command to download the entire directory:
rsync -avzP rsync://hgdownload.cse.ucsc.edu/goldenPath/hg38/database/ .
For a single file, e.g. gc5BaseBw.txt.gz
rsync -avzP
rsync://hgdownload.cse.ucsc.edu/goldenPath/hg38/database/gc5BaseBw.txt.gz .
Or with wget, all files:
wget --timestamping
'ftp://hgdownload.cse.ucsc.edu/goldenPath/hg38/database/*'
With wget, a single file:
wget --timestamping
'ftp://hgdownload.cse.ucsc.edu/goldenPath/hg38/database/gc5BaseBw.txt.gz'
-O gc5BaseBw.txt.gz
Please note that some files contents, such as this example gc5BaseBw.txt.gz,
will point to the data being hosted in another /gbdb/ location, which
refers to ftp://hgdownload.cse.ucsc.edu/gbdb/
To uncompress the *.txt.gz files:
gunzip <table>.txt.gz
The tables can be loaded directly from the .txt.gz compressed file.
It is not necessary to uncompress them to load into a database,
as shown in the example below.
To load one of the tables directly into your local mirror database,
for example the table chromInfo:
## create table from the sql definition
$ hgsql hg38 < chromInfo.sql
## load data from the txt.gz file
$ zcat chromInfo.txt.gz | hgsql hg38 --local-infile=1
-e 'LOAD DATA LOCAL INFILE "/dev/stdin" INTO TABLE chromInfo;'
-----------------------------------------------------------------------------
GenBank Data Usage
The GenBank database is designed to provide and encourage access within
the scientific community to the most up to date and comprehensive DNA
sequence information. Therefore, NCBI places no restrictions on the use
or distribution of the GenBank data. However, some submitters may claim
patent, copyright, or other intellectual property rights in all or a
portion of the data they have submitted. NCBI is not in a position to
assess the validity of such claims, and therefore cannot provide comment
or unrestricted permission concerning the use, copying, or distribution
of the information contained in GenBank.
-----------------------------------------------------------------------------
All the files and tables in this directory are freely usable for any purpose.
Name Last modified Size Description
Parent Directory -
gc5BaseBw.sql 2014-03-06 16:47 1.3K
gc5BaseBw.txt.gz 2014-03-06 16:47 63
extNcbiAltSequence.sql 2014-03-06 16:49 1.4K
extNcbiAltSequence.txt.gz 2014-03-06 16:49 3.3K
hg38ContigDiff.sql 2014-03-06 17:03 1.7K
hg38ContigDiff.txt.gz 2014-03-06 17:03 361K
cpgIslandExtUnmasked.sql 2014-03-06 17:28 1.7K
cpgIslandExtUnmasked.txt.gz 2014-03-06 17:28 1.1M
ctgPos2.sql 2014-03-06 17:28 1.5K
ctgPos2.txt.gz 2014-03-06 17:28 4.9K
nestedRepeats.sql 2014-03-06 17:41 1.9K
nestedRepeats.txt.gz 2014-03-06 17:41 18M
scaffolds.sql 2014-03-06 17:43 1.5K
scaffolds.txt.gz 2014-03-06 17:43 5.0K
seqNcbiAltSequence.sql 2014-03-06 17:43 1.6K
seqNcbiAltSequence.txt.gz 2014-03-06 17:43 4.4K
kg7ToKg8.sql 2014-05-18 21:44 1.5K
kg7ToKg8.txt.gz 2014-05-18 21:44 1.0M
centromeres.sql 2014-08-17 12:08 1.5K
centromeres.txt.gz 2014-08-17 12:08 1.5K
phastConsElements7way.sql 2014-08-17 12:08 1.6K
phastConsElements7way.txt.gz 2014-08-17 12:08 12M
phyloP7way.sql 2014-08-17 12:08 1.8K
phyloP7way.txt.gz 2014-08-17 12:09 83M
multiz7way.sql 2014-08-17 12:09 1.5K
multiz7way.txt.gz 2014-08-17 12:09 142M
multiz7wayFrames.sql 2014-08-17 12:10 1.7K
multiz7wayFrames.txt.gz 2014-08-17 12:10 15M
multiz7waySummary.sql 2014-08-17 12:10 1.6K
multiz7waySummary.txt.gz 2014-08-17 12:10 16M
phastCons7way.sql 2014-08-17 12:10 1.8K
phastCons7way.txt.gz 2014-08-17 12:10 77M
chainMonDom5.sql 2014-08-24 11:30 1.7K
chainMonDom5.txt.gz 2014-08-24 11:30 368M
chainMonDom5Link.sql 2014-08-24 11:31 1.5K
chainMonDom5Link.txt.gz 2014-08-24 11:33 1.4G
netMonDom5.sql 2014-08-24 11:42 2.1K
netMonDom5.txt.gz 2014-08-24 11:42 34M
wgEncodeGencode2wayConsPseudoV20.sql 2014-10-12 12:28 1.8K
wgEncodeGencode2wayConsPseudoV20.txt.gz 2014-10-12 12:28 185K
wgEncodeGencodeTranscriptSupportV20.sql 2014-10-12 12:28 1.5K
wgEncodeGencodeTranscriptSupportV20.txt.gz 2014-10-12 12:28 467K
wgEncodeGencodeAnnotationRemarkV20.sql 2014-10-12 12:28 1.4K
wgEncodeGencodeAnnotationRemarkV20.txt.gz 2014-10-12 12:28 386K
wgEncodeGencodeAttrsV20.sql 2014-10-12 12:28 2.0K
wgEncodeGencodeAttrsV20.txt.gz 2014-10-12 12:28 4.0M
wgEncodeGencodeTranscriptSourceV20.sql 2014-10-12 12:28 1.4K
wgEncodeGencodeTranscriptSourceV20.txt.gz 2014-10-12 12:28 906K
wgEncodeGencodeBasicV20.sql 2014-10-12 12:28 2.0K
wgEncodeGencodeBasicV20.txt.gz 2014-10-12 12:28 5.3M
wgEncodeGencodeCompV20.sql 2014-10-12 12:28 2.0K
wgEncodeGencodeCompV20.txt.gz 2014-10-12 12:28 8.0M
wgEncodeGencodeExonSupportV20.sql 2014-10-12 12:28 1.6K
wgEncodeGencodeUniProtV20.sql 2014-10-12 12:28 1.5K
wgEncodeGencodeUniProtV20.txt.gz 2014-10-12 12:28 1.3M
wgEncodeGencodeExonSupportV20.txt.gz 2014-10-12 12:28 82M
wgEncodeGencodeGeneSourceV20.sql 2014-10-12 12:29 1.4K
wgEncodeGencodeGeneSourceV20.txt.gz 2014-10-12 12:29 211K
wgEncodeGencodePdbV20.sql 2014-10-12 12:29 1.4K
wgEncodeGencodePdbV20.txt.gz 2014-10-12 12:29 322K
wgEncodeGencodePolyaV20.sql 2014-10-12 12:29 2.0K
wgEncodeGencodePolyaV20.txt.gz 2014-10-12 12:29 1.4M
wgEncodeGencodePseudoGeneV20.sql 2014-10-12 12:29 2.0K
wgEncodeGencodePseudoGeneV20.txt.gz 2014-10-12 12:29 644K
wgEncodeGencodePubMedV20.sql 2014-10-12 12:29 1.4K
wgEncodeGencodePubMedV20.txt.gz 2014-10-12 12:29 1.0M
wgEncodeGencodeRefSeqV20.sql 2014-10-12 12:29 1.4K
wgEncodeGencodeRefSeqV20.txt.gz 2014-10-12 12:29 500K
wgEncodeGencodeTagV20.sql 2014-10-12 12:29 1.4K
wgEncodeGencodeTagV20.txt.gz 2014-10-12 12:29 1.2M
wgEncodeGencodeTranscriptionSupportLevelV20.sql 2014-10-12 12:29 1.4K
wgEncodeGencodeTranscriptionSupportLevelV20.txt.gz 2014-10-12 12:29 913K
history.sql 2014-10-19 12:21 1.6K
history.txt.gz 2014-10-19 12:21 6.9K
genomicSuperDups.sql 2014-10-19 12:48 2.4K
genomicSuperDups.txt.gz 2014-10-19 12:48 4.0M
snp141.sql 2014-10-26 11:01 3.2K
snp141.txt.gz 2014-10-26 11:05 1.8G
snp141CodingDbSnp.sql 2014-10-26 11:11 1.7K
snp141CodingDbSnp.txt.gz 2014-10-26 11:11 56M
snp141Common.sql 2014-10-26 11:12 3.2K
snp141Common.txt.gz 2014-10-26 11:13 645M
snp141ExceptionDesc.sql 2014-10-26 11:15 1.4K
snp141ExceptionDesc.txt.gz 2014-10-26 11:15 1.0K
snp141Flagged.sql 2014-10-26 11:15 3.2K
snp141Flagged.txt.gz 2014-10-26 11:15 2.2M
snp141Mult.sql 2014-10-26 11:15 3.2K
snp141Mult.txt.gz 2014-10-26 11:15 80K
snp141OrthoPt4Pa2Rm3.sql 2014-10-26 11:15 2.2K
snp141OrthoPt4Pa2Rm3.txt.gz 2014-10-26 11:17 1.6G
snp141Seq.sql 2014-10-26 11:23 1.3K
snp141Seq.txt.gz 2014-10-26 11:23 392M
sibGene.sql 2014-11-03 00:14 1.7K
sibGene.txt.gz 2014-11-03 00:14 6.9M
knownToGencodeV20.sql 2014-12-14 17:01 1.4K
knownToGencodeV20.txt.gz 2014-12-14 17:01 520K
clinvarCnv.sql 2015-02-09 00:30 1.3K
clinvarCnv.txt.gz 2015-02-09 00:30 65
clinvarMain.sql 2015-02-09 00:30 1.3K
clinvarMain.txt.gz 2015-02-09 00:30 67
snp142CodingDbSnp.sql 2015-02-24 19:38 1.7K
snp142CodingDbSnp.txt.gz 2015-02-24 19:38 69M
snp142ExceptionDesc.sql 2015-02-24 19:41 1.4K
snp142ExceptionDesc.txt.gz 2015-02-24 19:41 1.0K
snp142OrthoPt4Pa2Rm3.sql 2015-02-24 19:41 2.2K
snp142OrthoPt4Pa2Rm3.txt.gz 2015-02-24 19:45 3.0G
snp142Seq.sql 2015-02-24 19:57 1.3K
snp142Seq.txt.gz 2015-02-24 19:57 673M
ucscRetroAli9.sql 2015-03-02 18:34 2.1K
ucscRetroAli9.txt.gz 2015-03-02 18:34 2.0M
ucscRetroCds9.sql 2015-03-02 18:34 1.3K
ucscRetroCds9.txt.gz 2015-03-02 18:34 1.8M
ucscRetroExtFile9.sql 2015-03-02 18:34 1.4K
ucscRetroExtFile9.txt.gz 2015-03-02 18:34 109
ucscRetroOrtho9.sql 2015-03-02 18:34 1.4K
ucscRetroOrtho9.txt.gz 2015-03-02 18:34 178K
ucscRetroSeq9.sql 2015-03-02 18:34 1.5K
ucscRetroSeq9.txt.gz 2015-03-02 18:34 18M
rmskAlignBaseline.sql 2015-03-22 17:42 1.9K
rmskAlignBaseline.txt.gz 2015-03-22 17:43 1.0G
rmskJoinedBaseline.sql 2015-03-22 17:51 1.8K
rmskJoinedBaseline.txt.gz 2015-03-22 17:51 138M
rmskOutBaseline.sql 2015-03-22 17:51 1.9K
rmskOutBaseline.txt.gz 2015-03-22 17:51 153M
wgEncodeGencodePubMedV22.sql 2015-05-03 16:13 1.4K
wgEncodeGencodePubMedV22.txt.gz 2015-05-03 16:13 1.0M
wgEncodeGencode2wayConsPseudoV22.sql 2015-05-03 16:13 1.8K
wgEncodeGencode2wayConsPseudoV22.txt.gz 2015-05-03 16:13 185K
wgEncodeGencodeAnnotationRemarkV22.sql 2015-05-03 16:13 1.4K
wgEncodeGencodeAnnotationRemarkV22.txt.gz 2015-05-03 16:13 387K
wgEncodeGencodeAttrsV22.sql 2015-05-03 16:13 2.0K
wgEncodeGencodePseudoGeneV22.sql 2015-05-03 16:13 2.0K
wgEncodeGencodePseudoGeneV22.txt.gz 2015-05-03 16:13 661K
wgEncodeGencodeUniProtV22.sql 2015-05-03 16:13 1.5K
wgEncodeGencodeUniProtV22.txt.gz 2015-05-03 16:13 873K
wgEncodeGencodeAttrsV22.txt.gz 2015-05-03 16:13 4.2M
wgEncodeGencodeBasicV22.sql 2015-05-03 16:13 2.0K
wgEncodeGencodeBasicV22.txt.gz 2015-05-03 16:13 4.9M
wgEncodeGencodeCompV22.sql 2015-05-03 16:13 2.0K
wgEncodeGencodeCompV22.txt.gz 2015-05-03 16:13 8.2M
wgEncodeGencodeRefSeqV22.sql 2015-05-03 16:13 1.4K
wgEncodeGencodeEntrezGeneV22.sql 2015-05-03 16:13 1.4K
wgEncodeGencodeEntrezGeneV22.txt.gz 2015-05-03 16:13 1.0M
wgEncodeGencodeExonSupportV22.sql 2015-05-03 16:13 1.6K
wgEncodeGencodeRefSeqV22.txt.gz 2015-05-03 16:13 522K
wgEncodeGencodeTagV22.sql 2015-05-03 16:13 1.4K
wgEncodeGencodeTagV22.txt.gz 2015-05-03 16:13 1.3M
wgEncodeGencodeExonSupportV22.txt.gz 2015-05-03 16:14 91M
wgEncodeGencodeGeneSourceV22.sql 2015-05-03 16:14 1.4K
wgEncodeGencodeGeneSourceV22.txt.gz 2015-05-03 16:14 221K
wgEncodeGencodePdbV22.sql 2015-05-03 16:14 1.4K
wgEncodeGencodePdbV22.txt.gz 2015-05-03 16:14 341K
wgEncodeGencodePolyaV22.sql 2015-05-03 16:14 2.0K
wgEncodeGencodePolyaV22.txt.gz 2015-05-03 16:14 1.4M
wgEncodeGencodeTranscriptSourceV22.sql 2015-05-03 16:14 1.4K
wgEncodeGencodeTranscriptSourceV22.txt.gz 2015-05-03 16:14 947K
wgEncodeGencodeTranscriptSupportV22.sql 2015-05-03 16:14 1.5K
wgEncodeGencodeTranscriptSupportV22.txt.gz 2015-05-03 16:14 677K
wgEncodeGencodeTranscriptionSupportLevelV22.sql 2015-05-03 16:14 1.4K
wgEncodeGencodeTranscriptionSupportLevelV22.txt.gz 2015-05-03 16:14 952K
affyGnf1h.sql 2015-05-11 01:50 2.1K
affyGnf1h.txt.gz 2015-05-11 01:50 596K
affyU133.sql 2015-05-11 01:50 2.1K
affyU133.txt.gz 2015-05-11 01:50 4.0M
affyU95.sql 2015-05-11 01:50 2.1K
affyU95.txt.gz 2015-05-11 01:50 2.1M
gnfAtlas2.sql 2015-05-11 01:50 1.9K
gnfAtlas2.txt.gz 2015-05-11 01:50 9.0M
chainMm10.sql 2015-05-18 03:41 1.7K
chainMm10.txt.gz 2015-05-18 03:41 78M
chainMm10Link.sql 2015-05-18 03:41 1.5K
chainMm10Link.txt.gz 2015-05-18 03:42 587M
netMm10.sql 2015-05-18 03:46 2.1K
netMm10.txt.gz 2015-05-18 03:46 75M
chainTarSyr2.sql 2015-05-25 04:42 1.7K
chainTarSyr2.txt.gz 2015-05-25 04:43 656M
chainTarSyr2Link.sql 2015-05-25 04:45 1.5K
chainTarSyr2Link.txt.gz 2015-05-25 04:48 1.7G
multiz20waySummary.sql 2015-05-25 04:54 1.6K
multiz20waySummary.txt.gz 2015-05-25 04:54 37M
netTarSyr2.sql 2015-05-25 04:54 2.1K
netTarSyr2.txt.gz 2015-05-25 04:54 71M
multiz20way.sql 2015-05-25 04:54 1.5K
multiz20way.txt.gz 2015-05-25 04:55 367M
multiz20wayFrames.sql 2015-05-25 04:56 1.7K
multiz20wayFrames.txt.gz 2015-05-25 04:56 19M
phastCons20way.sql 2015-05-25 04:56 1.8K
phastCons20way.txt.gz 2015-05-25 04:56 76M
phastConsElements20way.sql 2015-05-25 04:57 1.6K
phastConsElements20way.txt.gz 2015-05-25 04:57 21M
phyloP20way.sql 2015-05-25 04:57 1.8K
phyloP20way.txt.gz 2015-05-25 04:57 87M
altSeqLiftOverPslP3.sql 2015-06-01 02:23 2.1K
altSeqLiftOverPslP3.txt.gz 2015-06-01 02:23 18K
wgEncodeBroadHistoneGm12878H3k4me1StdSig.sql 2015-06-22 02:06 1.4K
wgEncodeBroadHistoneGm12878H3k4me1StdSig.txt.gz 2015-06-22 02:06 140
wgEncodeBroadHistoneGm12878H3k4me3StdSig.sql 2015-06-22 02:06 1.4K
wgEncodeBroadHistoneGm12878H3k4me3StdSig.txt.gz 2015-06-22 02:06 140
wgEncodeBroadHistoneGm12878H3k27acStdSig.sql 2015-06-22 02:06 1.4K
wgEncodeBroadHistoneGm12878H3k27acStdSig.txt.gz 2015-06-22 02:06 140
wgEncodeBroadHistoneH1hescH3k4me1StdSig.sql 2015-06-22 02:06 1.4K
wgEncodeBroadHistoneH1hescH3k4me1StdSig.txt.gz 2015-06-22 02:06 138
wgEncodeBroadHistoneH1hescH3k4me3StdSig.sql 2015-06-22 02:06 1.4K
wgEncodeBroadHistoneH1hescH3k4me3StdSig.txt.gz 2015-06-22 02:06 138
wgEncodeBroadHistoneH1hescH3k27acStdSig.sql 2015-06-22 02:06 1.4K
wgEncodeBroadHistoneH1hescH3k27acStdSig.txt.gz 2015-06-22 02:06 138
wgEncodeBroadHistoneHsmmH3k4me1StdSig.sql 2015-06-22 02:06 1.4K
wgEncodeBroadHistoneHsmmH3k4me1StdSig.txt.gz 2015-06-22 02:06 134
wgEncodeBroadHistoneHsmmH3k4me3StdSig.sql 2015-06-22 02:06 1.4K
wgEncodeBroadHistoneHsmmH3k4me3StdSig.txt.gz 2015-06-22 02:06 134
wgEncodeBroadHistoneHsmmH3k27acStdSig.sql 2015-06-22 02:06 1.4K
wgEncodeBroadHistoneHsmmH3k27acStdSig.txt.gz 2015-06-22 02:06 134
wgEncodeBroadHistoneHuvecH3k4me1StdSig.sql 2015-06-22 02:06 1.4K
wgEncodeBroadHistoneHuvecH3k4me1StdSig.txt.gz 2015-06-22 02:06 136
wgEncodeBroadHistoneHuvecH3k4me3StdSig.sql 2015-06-22 02:06 1.4K
wgEncodeBroadHistoneHuvecH3k4me3StdSig.txt.gz 2015-06-22 02:06 136
wgEncodeBroadHistoneHuvecH3k27acStdSig.sql 2015-06-22 02:06 1.4K
wgEncodeBroadHistoneHuvecH3k27acStdSig.txt.gz 2015-06-22 02:06 136
wgEncodeBroadHistoneK562H3k4me1StdSig.sql 2015-06-22 02:06 1.4K
wgEncodeBroadHistoneK562H3k4me1StdSig.txt.gz 2015-06-22 02:06 134
wgEncodeBroadHistoneK562H3k4me3StdSig.sql 2015-06-22 02:06 1.4K
wgEncodeBroadHistoneK562H3k4me3StdSig.txt.gz 2015-06-22 02:06 134
wgEncodeBroadHistoneK562H3k27acStdSig.sql 2015-06-22 02:06 1.4K
wgEncodeBroadHistoneK562H3k27acStdSig.txt.gz 2015-06-22 02:06 134
wgEncodeBroadHistoneNhekH3k4me1StdSig.sql 2015-06-22 02:06 1.4K
wgEncodeBroadHistoneNhekH3k4me1StdSig.txt.gz 2015-06-22 02:06 133
wgEncodeBroadHistoneNhekH3k27acStdSig.sql 2015-06-22 02:06 1.4K
wgEncodeBroadHistoneNhekH3k27acStdSig.txt.gz 2015-06-22 02:06 133
wgEncodeBroadHistoneNhekH3k4me3StdSig.sql 2015-06-22 02:06 1.4K
wgEncodeBroadHistoneNhekH3k4me3StdSig.txt.gz 2015-06-22 02:06 133
wgEncodeBroadHistoneNhlfH3k4me1StdSig.sql 2015-06-22 02:06 1.4K
wgEncodeBroadHistoneNhlfH3k4me1StdSig.txt.gz 2015-06-22 02:06 134
wgEncodeBroadHistoneNhlfH3k4me3StdSig.sql 2015-06-22 02:06 1.4K
wgEncodeBroadHistoneNhlfH3k4me3StdSig.txt.gz 2015-06-22 02:06 134
wgEncodeBroadHistoneNhlfH3k27acStdSig.sql 2015-06-22 02:06 1.4K
wgEncodeBroadHistoneNhlfH3k27acStdSig.txt.gz 2015-06-22 02:06 134
wgEncodeRegDnaseClusteredInputs.sql 2015-06-22 02:06 1.4K
wgEncodeRegDnaseClusteredInputs.txt.gz 2015-06-22 02:06 1.0K
wgEncodeRegDnaseClusteredSources.sql 2015-06-22 02:06 1.4K
wgEncodeRegDnaseClusteredSources.txt.gz 2015-06-22 02:06 687
wgEncodeRegDnaseUwA549Hotspot.sql 2015-06-22 02:06 1.3K
wgEncodeRegDnaseUwA549Hotspot.txt.gz 2015-06-22 02:06 114
wgEncodeRegDnaseUwAg04450Signal.sql 2015-06-22 02:06 1.3K
wgEncodeRegDnaseUwAg04450Signal.txt.gz 2015-06-22 02:06 108
wgEncodeRegDnaseUwAg09309Hotspot.sql 2015-06-22 02:06 1.3K
wgEncodeRegDnaseUwAg09309Hotspot.txt.gz 2015-06-22 02:06 120
wgEncodeRegDnaseUwA549Signal.sql 2015-06-22 02:06 1.3K
wgEncodeRegDnaseUwA549Signal.txt.gz 2015-06-22 02:06 102
wgEncodeRegDnaseUwAg04449Hotspot.sql 2015-06-22 02:06 1.3K
wgEncodeRegDnaseUwAg04449Hotspot.txt.gz 2015-06-22 02:06 120
wgEncodeRegDnaseUwAg09309Signal.sql 2015-06-22 02:06 1.3K
wgEncodeRegDnaseUwAg09309Signal.txt.gz 2015-06-22 02:06 108
wgEncodeRegDnaseUwAg09319Hotspot.sql 2015-06-22 02:06 1.3K
wgEncodeRegDnaseUwAg09319Hotspot.txt.gz 2015-06-22 02:06 120
wgEncodeRegDnaseUwAg04449Signal.sql 2015-06-22 02:06 1.3K
wgEncodeRegDnaseUwAg04449Signal.txt.gz 2015-06-22 02:06 108
wgEncodeRegDnaseUwAg04450Hotspot.sql 2015-06-22 02:06 1.3K
wgEncodeRegDnaseUwAg04450Hotspot.txt.gz 2015-06-22 02:06 120
wgEncodeRegDnaseUwAg09319Signal.sql 2015-06-22 02:06 1.3K
wgEncodeRegDnaseUwAg09319Signal.txt.gz 2015-06-22 02:06 108
wgEncodeRegDnaseUwAg10803Hotspot.sql 2015-06-22 02:06 1.3K
wgEncodeRegDnaseUwAg10803Hotspot.txt.gz 2015-06-22 02:06 120
wgEncodeRegDnaseUwAg10803Signal.sql 2015-06-22 02:06 1.3K
wgEncodeRegDnaseUwAg10803Signal.txt.gz 2015-06-22 02:06 108
wgEncodeRegDnaseUwAoafHotspot.sql 2015-06-22 02:06 1.3K
wgEncodeRegDnaseUwAoafHotspot.txt.gz 2015-06-22 02:06 114
wgEncodeRegDnaseUwAoafSignal.sql 2015-06-22 02:06 1.3K
wgEncodeRegDnaseUwAoafSignal.txt.gz 2015-06-22 02:06 102
wgEncodeRegDnaseUwBe2cHotspot.sql 2015-06-22 02:06 1.3K
wgEncodeRegDnaseUwBe2cHotspot.txt.gz 2015-06-22 02:06 114
wgEncodeRegDnaseUwBe2cSignal.sql 2015-06-22 02:06 1.3K
wgEncodeRegDnaseUwBe2cSignal.txt.gz 2015-06-22 02:06 102
wgEncodeRegDnaseUwBjHotspot.sql 2015-06-22 02:06 1.3K
wgEncodeRegDnaseUwBjHotspot.txt.gz 2015-06-22 02:06 110
wgEncodeRegDnaseUwBjSignal.sql 2015-06-22 02:06 1.3K
wgEncodeRegDnaseUwBjSignal.txt.gz 2015-06-22 02:06 98
wgEncodeRegDnaseUwBonemarrowmscHotspot.sql 2015-06-22 02:06 1.4K
wgEncodeRegDnaseUwBonemarrowmscHotspot.txt.gz 2015-06-22 02:06 132
wgEncodeRegDnaseUwCd20ro01778Signal.sql 2015-06-22 02:06 1.4K
wgEncodeRegDnaseUwCd20ro01778Signal.txt.gz 2015-06-22 02:06 116
wgEncodeRegDnaseUwBonemarrowmscSignal.sql 2015-06-22 02:06 1.4K
wgEncodeRegDnaseUwBonemarrowmscSignal.txt.gz 2015-06-22 02:06 120
wgEncodeRegDnaseUwCaco2Hotspot.sql 2015-06-22 02:06 1.3K
wgEncodeRegDnaseUwCaco2Hotspot.txt.gz 2015-06-22 02:06 116
wgEncodeRegDnaseUwGm04503Hotspot.sql 2015-06-22 02:06 1.3K
wgEncodeRegDnaseUwGm04503Hotspot.txt.gz 2015-06-22 02:06 120
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chainEquCab3.txt.gz 2019-07-28 05:18 178M
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chainEquCab3Link.txt.gz 2019-07-28 05:20 898M
netEquCab3.sql 2019-07-28 05:23 2.1K
netEquCab3.txt.gz 2019-07-28 05:23 71M
chainRheMac10.sql 2019-09-08 03:22 1.7K
chainRheMac10.txt.gz 2019-09-08 03:22 23M
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chainRheMac10Link.txt.gz 2019-09-08 03:22 215M
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mupitRanges.txt.gz 2019-09-08 03:23 908K
netRheMac10.sql 2019-09-08 03:23 2.1K
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wgEncodeGencodePdbV32.txt.gz 2019-09-26 10:12 576K
wgEncodeGencodePubMedV32.sql 2019-09-26 10:12 1.4K
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wgEncodeGencodeRefSeqV32.txt.gz 2019-09-26 10:12 759K
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wgEncodeGencodeAnnotationRemarkV32.txt.gz 2019-09-26 10:12 643K
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wgEncodeGencodeExonSupportV32.txt.gz 2019-09-26 10:14 66M
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wgEncodeGencodeTranscriptionSupportLevelV32.txt.gz 2019-09-26 11:00 810K
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intronEst.txt.gz 2019-10-20 09:32 238M
all_est.sql 2019-10-20 09:33 2.1K
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ccdsNotes.sql 2019-10-20 09:35 1.4K
ccdsNotes.txt.gz 2019-10-20 09:35 20K
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estOrientInfo.sql 2019-10-20 09:35 1.8K
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ccdsGene.sql 2019-10-20 09:43 1.9K
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lrg.sql 2019-11-03 03:55 1.3K
lrg.txt.gz 2019-11-03 03:55 50
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lrgCds.sql 2019-11-03 03:55 1.3K
lrgCds.txt.gz 2019-11-03 03:55 6.8K
lrgPep.sql 2019-11-03 03:55 1.3K
lrgPep.txt.gz 2019-11-03 03:55 417K
lrgTranscriptAli.sql 2019-11-03 03:55 2.1K
lrgTranscriptAli.txt.gz 2019-11-03 03:55 145K
chainGorGor6.sql 2019-11-21 09:03 1.7K
chainGorGor6.txt.gz 2019-11-21 09:03 50M
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wgEncodeGencodePdbV29.txt.gz 2020-01-19 03:23 522K
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knownToGencodeV32.sql 2020-01-19 03:23 1.4K
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tgpPhase3.sql 2020-01-19 03:23 1.3K
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wgEncodeGencodeExonSupportV29.txt.gz 2020-01-19 03:23 65M
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wgEncodeGencodeGeneSourceV29.txt.gz 2020-01-19 03:23 299K
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wgEncodeGencodeTranscriptSupportV29.txt.gz 2020-01-19 03:23 700K
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wgEncodeGencodeTranscriptionSupportLevelV29.txt.gz 2020-01-19 03:23 750K
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chainHg19ReMap.txt.gz 2020-02-11 12:16 134K
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wgEncodeGencodeGeneSourceV33.txt.gz 2020-02-16 03:26 313K
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wgEncodeGencodePdbV33.txt.gz 2020-02-16 03:26 595K
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wgEncodeGencodeAnnotationRemarkV34.txt.gz 2020-06-09 10:34 650K
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xenoMrna.sql 2020-08-17 18:38 2.1K
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refFlat.txt.gz 2020-08-17 18:56 7.7M
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xenoRefFlat.txt.gz 2020-08-17 19:10 18M
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xenoRefSeqAli.txt.gz 2020-08-17 19:17 17M
gbLoaded.sql 2020-08-17 19:17 1.6K
gbLoaded.txt.gz 2020-08-17 19:17 11K
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chainRBestMm39Link.txt.gz 2020-08-18 13:24 267M
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netRBestMm39.txt.gz 2020-08-18 13:27 71M
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netCalJac4.sql 2020-09-04 00:01 2.1K
netCalJac4.txt.gz 2020-09-04 00:01 51M
wgEncodeGencode2wayConsPseudoV36.sql 2020-12-21 20:28 1.8K
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wgEncodeGencodeGeneSourceV36.txt.gz 2020-12-21 20:32 324K
wgEncodeGencodeTranscriptSourceV36.sql 2020-12-21 20:32 1.5K
wgEncodeGencodeTranscriptSourceV36.txt.gz 2020-12-21 20:32 1.2M
wgEncodeGencodeTranscriptSupportV36.sql 2020-12-21 20:32 1.5K
wgEncodeGencodeTranscriptSupportV36.txt.gz 2020-12-21 20:32 388K
wgEncodeGencodePdbV36.sql 2020-12-21 20:32 1.4K
wgEncodeGencodePdbV36.txt.gz 2020-12-21 20:32 619K
wgEncodeGencodePubMedV36.sql 2020-12-21 20:32 1.4K
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wgEncodeGencodeGeneSymbolV36.sql 2020-12-21 20:32 1.5K
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wgEncodeGencodeRefSeqV36.sql 2020-12-21 20:32 1.5K
wgEncodeGencodeRefSeqV36.txt.gz 2020-12-21 20:32 801K
wgEncodeGencodeUniProtV36.sql 2020-12-21 20:32 1.5K
wgEncodeGencodeUniProtV36.txt.gz 2020-12-21 20:32 1.2M
wgEncodeGencodeAnnotationRemarkV36.sql 2020-12-21 20:32 1.4K
wgEncodeGencodeAnnotationRemarkV36.txt.gz 2020-12-21 20:32 634K
wgEncodeGencodeEntrezGeneV36.sql 2020-12-21 20:32 1.4K
wgEncodeGencodeEntrezGeneV36.txt.gz 2020-12-21 20:32 1.1M
wgEncodeGencodePseudoGeneV36.sql 2020-12-21 20:32 2.0K
wgEncodeGencodePseudoGeneV36.txt.gz 2020-12-21 20:32 763K
wgEncodeGencodeBasicV36.sql 2020-12-21 20:33 2.0K
wgEncodeGencodeBasicV36.txt.gz 2020-12-21 20:33 5.3M
wgEncodeGencodeAttrsV36.sql 2020-12-21 20:33 2.1K
wgEncodeGencodeAttrsV36.txt.gz 2020-12-21 20:33 5.2M
wgEncodeGencodeCompV36.sql 2020-12-21 20:33 2.0K
wgEncodeGencodeCompV36.txt.gz 2020-12-21 20:33 9.3M
wgEncodeGencodeTagV36.sql 2020-12-21 20:33 1.4K
wgEncodeGencodeTagV36.txt.gz 2020-12-21 20:33 2.1M
wgEncodeGencodeExonSupportV36.sql 2020-12-21 20:34 1.6K
wgEncodeGencodeExonSupportV36.txt.gz 2020-12-21 20:34 61M
wgEncodeGencodeTranscriptionSupportLevelV36.sql 2020-12-22 01:39 1.5K
wgEncodeGencodeTranscriptionSupportLevelV36.txt.gz 2020-12-22 01:39 824K
ccdsKgMap.sql 2021-01-26 13:10 1.5K
ccdsKgMap.txt.gz 2021-01-26 13:10 819K
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cgapAlias.txt.gz 2021-01-26 16:50 1.3M
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cgapBiocPathway.txt.gz 2021-01-26 16:50 25K
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cgapBiocDesc.txt.gz 2021-01-26 16:50 6.8K
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kg12ToKg13.txt.gz 2021-02-03 13:46 3.7M
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knownToLynx.txt.gz 2021-02-03 14:37 1.2M
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chainRn7.txt.gz 2021-02-04 18:12 341M
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netRn7.txt.gz 2021-02-04 18:25 76M
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wgEncodeGencode2wayConsPseudoV35.txt.gz 2021-02-22 15:42 184K
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wgEncodeGencodeExonSupportV35.txt.gz 2021-02-22 15:43 67M
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wgEncodeGencode2wayConsPseudoV37.txt.gz 2021-03-08 16:59 181K
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wgEncodeGencodeExonSupportV37.txt.gz 2021-03-08 17:45 55M
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chainCanFam6.txt.gz 2021-05-17 21:54 217M
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chainCanFam6Link.txt.gz 2021-05-17 22:02 939M
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netCanFam6.txt.gz 2021-05-17 22:06 78M
wgEncodeGencode2wayConsPseudoV38.sql 2021-09-25 14:56 1.8K
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wgEncodeGencodeGeneSourceV38.txt.gz 2021-09-25 15:03 323K
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wgEncodeGencodeTranscriptSupportV38.txt.gz 2021-09-25 15:03 293K
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wgEncodeGencodeRefSeqV38.txt.gz 2021-09-25 15:03 837K
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wgEncodeGencodeAnnotationRemarkV38.txt.gz 2021-09-25 15:03 670K
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wgEncodeGencodePseudoGeneV38.txt.gz 2021-09-25 15:04 775K
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wgEncodeGencodeExonSupportV38.txt.gz 2021-09-25 15:05 61M
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wgEncodeGencodeTranscriptionSupportLevelV38.txt.gz 2021-09-26 01:39 836K
kgV36ToKgV38.sql 2021-09-27 17:29 1.5K
kgV36ToKgV38.txt.gz 2021-09-27 17:29 3.5M
knownToGencodeV38.sql 2021-09-27 17:31 1.4K
knownToGencodeV38.txt.gz 2021-09-27 17:31 1.3M
iscaBenign.sql 2021-10-11 04:34 1.7K
iscaBenign.txt.gz 2021-10-11 04:34 633K
iscaCuratedBenign.sql 2021-10-11 04:34 1.8K
iscaCuratedBenign.txt.gz 2021-10-11 04:34 1.9K
iscaPathogenic.sql 2021-10-11 04:34 1.8K
iscaPathogenic.txt.gz 2021-10-11 04:34 657K
iscaCuratedPathogenic.sql 2021-10-11 04:34 1.8K
iscaCuratedPathogenic.txt.gz 2021-10-11 04:34 48K
iscaUncertain.sql 2021-10-11 04:34 1.7K
iscaUncertain.txt.gz 2021-10-11 04:34 1.0M
iscaLikelyBenign.sql 2021-10-11 04:34 1.8K
iscaLikelyBenign.txt.gz 2021-10-11 04:34 377K
iscaLikelyPathogenic.sql 2021-10-11 04:34 1.8K
iscaLikelyPathogenic.txt.gz 2021-10-11 04:34 71K
iscaPathGainCum.sql 2021-10-11 04:38 1.5K
iscaPathGainCum.txt.gz 2021-10-11 04:38 29K
iscaPathLossCum.sql 2021-10-11 04:38 1.5K
iscaPathLossCum.txt.gz 2021-10-11 04:38 57K
iscaBenignGainCum.sql 2021-10-11 04:38 1.5K
iscaBenignGainCum.txt.gz 2021-10-11 04:38 33K
iscaBenignLossCum.sql 2021-10-11 04:38 1.5K
iscaBenignLossCum.txt.gz 2021-10-11 04:38 22K
ensemblLift.sql 2021-10-11 15:36 1.4K
ensemblLift.txt.gz 2021-10-11 15:36 3.9K
ucscToEnsembl.sql 2021-10-11 15:36 1.4K
ucscToEnsembl.txt.gz 2021-10-11 15:36 4.4K
wgEncodeGencode2wayConsPseudoV39.sql 2022-01-16 13:09 1.8K
wgEncodeGencode2wayConsPseudoV39.txt.gz 2022-01-16 13:09 184K
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wgEncodeGencodeGeneSourceV39.txt.gz 2022-01-16 13:13 327K
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wgEncodeGencodeTranscriptSupportV39.txt.gz 2022-01-16 13:13 238K
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wgEncodeGencodePdbV39.txt.gz 2022-01-16 13:13 725K
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wgEncodeGencodeCompV39.txt.gz 2022-01-16 13:24 9.6M
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wgEncodeGencodeExonSupportV39.txt.gz 2022-01-16 13:25 60M
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wgEncodeGencodeAttrsV39.txt.gz 2022-01-16 13:25 5.4M
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wgEncodeGencodeAnnotationRemarkV39.txt.gz 2022-01-16 13:25 708K
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wgEncodeGencodeBasicV39.txt.gz 2022-01-16 13:25 5.4M
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wgEncodeGencodePseudoGeneV39.txt.gz 2022-01-16 13:25 795K
wgEncodeGencodeTagV39.sql 2022-01-16 13:25 1.4K
wgEncodeGencodeTagV39.txt.gz 2022-01-16 13:25 2.5M
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wgEncodeGencodePubMedV39.txt.gz 2022-01-16 13:25 1.4M
wgEncodeGencodeTranscriptionSupportLevelV39.sql 2022-01-16 13:38 1.5K
wgEncodeGencodeTranscriptionSupportLevelV39.txt.gz 2022-01-16 13:38 858K
kgV38ToKgV39.sql 2022-01-18 17:10 1.5K
kgV38ToKgV39.txt.gz 2022-01-18 17:10 3.9M
knownToGencodeV39.sql 2022-01-18 17:12 1.4K
knownToGencodeV39.txt.gz 2022-01-18 17:12 1.4M
wgEncodeGencode2wayConsPseudoV40.sql 2022-04-21 22:56 1.8K
wgEncodeGencode2wayConsPseudoV40.txt.gz 2022-04-21 22:56 184K
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wgEncodeGencodeTranscriptSupportV40.txt.gz 2022-04-21 23:00 224K
wgEncodeGencodeGeneSourceV40.sql 2022-04-21 23:00 1.4K
wgEncodeGencodeGeneSourceV40.txt.gz 2022-04-21 23:00 327K
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wgEncodeGencodePdbV40.txt.gz 2022-04-21 23:00 745K
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wgEncodeGencodeGeneSymbolV40.txt.gz 2022-04-21 23:00 1.6M
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wgEncodeGencodeAnnotationRemarkV40.txt.gz 2022-04-21 23:00 714K
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wgEncodeGencodeTranscriptSourceV40.txt.gz 2022-04-21 23:00 1.2M
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wgEncodeGencodeRefSeqV40.txt.gz 2022-04-21 23:00 833K
wgEncodeGencodePubMedV40.sql 2022-04-21 23:00 1.4K
wgEncodeGencodePubMedV40.txt.gz 2022-04-21 23:00 1.4M
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wgEncodeGencodePseudoGeneV40.txt.gz 2022-04-21 23:01 796K
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wgEncodeGencodeBasicV40.txt.gz 2022-04-21 23:01 5.4M
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wgEncodeGencodeCompV40.txt.gz 2022-04-21 23:01 9.7M
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wgEncodeGencodeAttrsV40.txt.gz 2022-04-21 23:01 7.3M
wgEncodeGencodeTagV40.sql 2022-04-21 23:01 1.4K
wgEncodeGencodeTagV40.txt.gz 2022-04-21 23:01 2.0M
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wgEncodeGencodeExonSupportV40.txt.gz 2022-04-21 23:03 60M
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wgEncodeGencodeTranscriptionSupportLevelV40.txt.gz 2022-04-22 01:51 863K
kgV39ToKgV41.sql 2022-05-15 13:36 1.5K
kgV39ToKgV41.txt.gz 2022-05-15 13:36 4.0M
knownToGencodeV41.sql 2022-05-15 13:38 1.4K
knownToGencodeV41.txt.gz 2022-05-15 13:38 1.4M
sibTxGraph.sql 2022-07-07 16:23 2.1K
sibTxGraph.txt.gz 2022-07-07 16:23 54M
wgEncodeGencode2wayConsPseudoV41.sql 2022-07-12 10:20 1.8K
wgEncodeGencode2wayConsPseudoV41.txt.gz 2022-07-12 10:20 184K
wgEncodeGencodePolyaV41.sql 2022-07-12 10:20 2.0K
wgEncodeGencodePolyaV41.txt.gz 2022-07-12 10:20 1.7M
wgEncodeGencodePdbV41.sql 2022-07-12 10:51 1.4K
wgEncodeGencodePdbV41.txt.gz 2022-07-12 10:51 778K
wgEncodeGencodeTranscriptSupportV41.sql 2022-07-12 10:51 1.5K
wgEncodeGencodeTranscriptSupportV41.txt.gz 2022-07-12 10:51 195K
wgEncodeGencodeGeneSymbolV41.sql 2022-07-12 10:51 1.5K
wgEncodeGencodeGeneSymbolV41.txt.gz 2022-07-12 10:51 1.6M
wgEncodeGencodeRefSeqV41.sql 2022-07-12 10:51 1.5K
wgEncodeGencodeRefSeqV41.txt.gz 2022-07-12 10:51 865K
wgEncodeGencodeEntrezGeneV41.sql 2022-07-12 10:51 1.4K
wgEncodeGencodeEntrezGeneV41.txt.gz 2022-07-12 10:51 1.2M
wgEncodeGencodeAnnotationRemarkV41.sql 2022-07-12 10:51 1.4K
wgEncodeGencodeAnnotationRemarkV41.txt.gz 2022-07-12 10:51 728K
wgEncodeGencodeUniProtV41.sql 2022-07-12 10:51 1.5K
wgEncodeGencodeUniProtV41.txt.gz 2022-07-12 10:51 1.2M
wgEncodeGencodeTranscriptSourceV41.sql 2022-07-12 10:51 1.5K
wgEncodeGencodeTranscriptSourceV41.txt.gz 2022-07-12 10:51 1.3M
wgEncodeGencodeGeneSourceV41.sql 2022-07-12 10:51 1.4K
wgEncodeGencodeGeneSourceV41.txt.gz 2022-07-12 10:51 331K
wgEncodeGencodePubMedV41.sql 2022-07-12 10:51 1.4K
wgEncodeGencodePubMedV41.txt.gz 2022-07-12 10:51 1.4M
wgEncodeGencodePseudoGeneV41.sql 2022-07-12 10:51 2.0K
wgEncodeGencodePseudoGeneV41.txt.gz 2022-07-12 10:51 810K
wgEncodeGencodeBasicV41.sql 2022-07-12 10:52 2.0K
wgEncodeGencodeBasicV41.txt.gz 2022-07-12 10:52 5.5M
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wgEncodeGencodeExonSupportV41.txt.gz 2022-07-12 10:53 60M
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wgEncodeGencodeCompV41.txt.gz 2022-07-12 10:53 9.8M
wgEncodeGencodeTagV41.sql 2022-07-12 10:54 1.4K
wgEncodeGencodeTagV41.txt.gz 2022-07-12 10:54 2.1M
wgEncodeGencodeAttrsV41.sql 2022-07-12 10:54 2.1K
wgEncodeGencodeAttrsV41.txt.gz 2022-07-12 10:54 7.3M
wgEncodeGencodeTranscriptionSupportLevelV41.sql 2022-07-12 10:54 1.5K
wgEncodeGencodeTranscriptionSupportLevelV41.txt.gz 2022-07-12 10:54 876K
gap.sql 2022-10-18 23:39 1.6K
gap.txt.gz 2022-10-18 23:39 12K
gold.sql 2022-10-18 23:39 1.7K
gold.txt.gz 2022-10-18 23:39 916K
rmsk.sql 2022-10-18 23:39 1.9K
rmsk.txt.gz 2022-10-18 23:39 148M
simpleRepeat.sql 2022-10-18 23:39 1.9K
simpleRepeat.txt.gz 2022-10-18 23:39 28M
windowmaskerSdust.sql 2022-10-18 23:39 1.5K
windowmaskerSdust.txt.gz 2022-10-18 23:39 156M
cpgIslandExt.sql 2022-10-18 23:39 1.7K
cpgIslandExt.txt.gz 2022-10-18 23:39 701K
genscan.sql 2022-10-18 23:39 1.7K
genscan.txt.gz 2022-10-18 23:39 3.2M
augustusGene.sql 2022-10-18 23:39 2.0K
augustusGene.txt.gz 2022-10-18 23:39 2.6M
chromInfo.sql 2022-10-26 01:39 1.4K
chromInfo.txt.gz 2022-10-26 01:39 6.0K
ucscToINSDC.sql 2022-10-28 21:15 1.4K
ucscToINSDC.txt.gz 2022-10-28 21:15 7.2K
cytoBandIdeo.sql 2022-10-28 21:15 1.5K
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