This directory contains zipped multiple alignments of the Chicken genome
(galGal2, Feb. 2004) to the following assemblies:
- Human May 2004 (hg17)
- Mouse May 2004 (mm5)
- Opossum Oct. 2004 (monDom1)
- Frog Oct. 2004 (xenTro1)
- Zebrafish Jun. 2004 (danRer2)
- Tetraodon Feb. 2004 (tetNig1)
The chr*.maf.gz files each contain all the alignments to that
particular chicken chromosome.
For a description of the multiple alignment format (MAF),
see http://genome.ucsc.edu/goldenPath/help/maf.html.
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If you plan to download a large file or multiple files from this
directory, we recommend you use ftp rather than downloading the files
via our website. To do so, ftp to hgdownload.cse.ucsc.edu, then go to
the directory goldenPath/galGal2/multiz7way/. To download multiple
files, use the "mget" command:
mget <filename1> <filename2> ...
- or -
mget -a (to download all the files in the directory)
All the files in this directory are freely available for public use.
For data restrictions regarding the aligned genomes, see
http://genome.ucsc.edu/goldenPath/credits.html .
Name Last modified Size Description
Parent Directory -
chr1.maf.gz 2005-04-27 10:59 34M
chrUn.maf.gz 2005-04-27 11:02 32M
chr2.maf.gz 2005-04-27 11:00 27M
chr3.maf.gz 2005-04-27 11:00 22M
chr4.maf.gz 2005-04-27 11:01 18M
chr5.maf.gz 2005-04-27 11:01 13M
chr7.maf.gz 2005-04-27 11:01 10M
chr8.maf.gz 2005-04-27 11:01 8.2M
chr6.maf.gz 2005-04-27 11:01 7.7M
chr10.maf.gz 2005-04-27 10:59 6.2M
chr9.maf.gz 2005-04-27 11:01 5.9M
chrZ.maf.gz 2005-04-27 11:02 5.9M
chr14.maf.gz 2005-04-27 10:59 5.8M
chr11.maf.gz 2005-04-27 10:59 5.3M
chr12.maf.gz 2005-04-27 10:59 5.0M
chr13.maf.gz 2005-04-27 10:59 4.4M
chr15.maf.gz 2005-04-27 10:59 4.0M
chr20.maf.gz 2005-04-27 11:00 3.9M
chr19.maf.gz 2005-04-27 10:59 3.6M
chr17.maf.gz 2005-04-27 10:59 3.5M
chrZ_random.maf.gz 2005-04-27 11:02 3.0M
chr18.maf.gz 2005-04-27 10:59 2.7M
chr21.maf.gz 2005-04-27 11:00 2.5M
chr24.maf.gz 2005-04-27 11:00 2.1M
chr23.maf.gz 2005-04-27 11:00 2.0M
chr28.maf.gz 2005-04-27 11:00 1.9M
chr26.maf.gz 2005-04-27 11:00 1.6M
chrW.maf.gz 2005-04-27 11:02 1.3M
chr3_random.maf.gz 2005-04-27 11:00 928K
chr27.maf.gz 2005-04-27 11:00 911K
chr10_random.maf.gz 2005-04-27 10:59 668K
chr11_random.maf.gz 2005-04-27 10:59 643K
chr27_random.maf.gz 2005-04-27 11:00 606K
chr32.maf.gz 2005-04-27 11:00 574K
chr22.maf.gz 2005-04-27 11:00 478K
chr13_random.maf.gz 2005-04-27 10:59 397K
chr1_random.maf.gz 2005-04-27 10:59 248K
chr4_random.maf.gz 2005-04-27 11:01 197K
chrE26C13.maf.gz 2005-04-27 11:01 148K
chr16.maf.gz 2005-04-27 10:59 141K
chr16_random.maf.gz 2005-04-27 10:59 97K
chrW_random.maf.gz 2005-04-27 11:02 49K
chr24_random.maf.gz 2005-04-27 11:00 46K
chrM.maf.gz 2005-04-27 11:01 36K
chrE22C19W28.maf.gz 2005-04-27 11:01 36K
chr2_random.maf.gz 2005-04-27 11:00 23K
chr5_random.maf.gz 2005-04-27 11:01 14K
chr28_random.maf.gz 2005-04-27 11:00 14K
chrE50C23.maf.gz 2005-04-27 11:01 10K
chr32_random.maf.gz 2005-04-27 11:00 4.3K
chr7_random.maf.gz 2005-04-27 11:01 2.7K
md5sum.txt 2005-04-27 11:02 2.5K
chrE64.maf.gz 2005-04-27 11:01 2.1K
chr6_random.maf.gz 2005-04-27 11:01 534
maf/ 2019-11-06 10:55 -