This directory contains zipped multiple alignments of the Chicken genome
(galGal2, Feb. 2004) to the following assemblies:
- Human May 2004 (hg17)
- Mouse May 2004 (mm5)
- Opossum Oct. 2004 (monDom1)
- Frog Oct. 2004 (xenTro1)
- Zebrafish Jun. 2004 (danRer2)
- Tetraodon Feb. 2004 (tetNig1)
The chr*.maf.gz files each contain all the alignments to that
particular chicken chromosome.
For a description of the multiple alignment format (MAF),
see http://genome.ucsc.edu/goldenPath/help/maf.html.
-------------------------------------------------------------------
If you plan to download a large file or multiple files from this
directory, we recommend you use ftp rather than downloading the files
via our website. To do so, ftp to hgdownload.cse.ucsc.edu, then go to
the directory goldenPath/galGal2/multiz7way/. To download multiple
files, use the "mget" command:
mget <filename1> <filename2> ...
- or -
mget -a (to download all the files in the directory)
All the files in this directory are freely available for public use.
For data restrictions regarding the aligned genomes, see
http://genome.ucsc.edu/goldenPath/credits.html .
Name Last modified Size Description
Parent Directory -
chr1.maf.gz 2005-04-27 10:59 34M
chr10.maf.gz 2005-04-27 10:59 6.2M
chr10_random.maf.gz 2005-04-27 10:59 668K
chr11.maf.gz 2005-04-27 10:59 5.3M
chr11_random.maf.gz 2005-04-27 10:59 643K
chr12.maf.gz 2005-04-27 10:59 5.0M
chr13.maf.gz 2005-04-27 10:59 4.4M
chr13_random.maf.gz 2005-04-27 10:59 397K
chr14.maf.gz 2005-04-27 10:59 5.8M
chr15.maf.gz 2005-04-27 10:59 4.0M
chr16.maf.gz 2005-04-27 10:59 141K
chr16_random.maf.gz 2005-04-27 10:59 97K
chr17.maf.gz 2005-04-27 10:59 3.5M
chr18.maf.gz 2005-04-27 10:59 2.7M
chr19.maf.gz 2005-04-27 10:59 3.6M
chr1_random.maf.gz 2005-04-27 10:59 248K
chr2.maf.gz 2005-04-27 11:00 27M
chr20.maf.gz 2005-04-27 11:00 3.9M
chr21.maf.gz 2005-04-27 11:00 2.5M
chr22.maf.gz 2005-04-27 11:00 478K
chr23.maf.gz 2005-04-27 11:00 2.0M
chr24.maf.gz 2005-04-27 11:00 2.1M
chr24_random.maf.gz 2005-04-27 11:00 46K
chr26.maf.gz 2005-04-27 11:00 1.6M
chr27.maf.gz 2005-04-27 11:00 911K
chr27_random.maf.gz 2005-04-27 11:00 606K
chr2_random.maf.gz 2005-04-27 11:00 23K
chr28.maf.gz 2005-04-27 11:00 1.9M
chr28_random.maf.gz 2005-04-27 11:00 14K
chr3.maf.gz 2005-04-27 11:00 22M
chr32.maf.gz 2005-04-27 11:00 574K
chr32_random.maf.gz 2005-04-27 11:00 4.3K
chr3_random.maf.gz 2005-04-27 11:00 928K
chr4.maf.gz 2005-04-27 11:01 18M
chr4_random.maf.gz 2005-04-27 11:01 197K
chr5.maf.gz 2005-04-27 11:01 13M
chr5_random.maf.gz 2005-04-27 11:01 14K
chr6.maf.gz 2005-04-27 11:01 7.7M
chr6_random.maf.gz 2005-04-27 11:01 534
chr7.maf.gz 2005-04-27 11:01 10M
chr7_random.maf.gz 2005-04-27 11:01 2.7K
chr8.maf.gz 2005-04-27 11:01 8.2M
chr9.maf.gz 2005-04-27 11:01 5.9M
chrE22C19W28.maf.gz 2005-04-27 11:01 36K
chrE26C13.maf.gz 2005-04-27 11:01 148K
chrE50C23.maf.gz 2005-04-27 11:01 10K
chrE64.maf.gz 2005-04-27 11:01 2.1K
chrM.maf.gz 2005-04-27 11:01 36K
chrUn.maf.gz 2005-04-27 11:02 32M
chrW.maf.gz 2005-04-27 11:02 1.3M
chrW_random.maf.gz 2005-04-27 11:02 49K
chrZ.maf.gz 2005-04-27 11:02 5.9M
chrZ_random.maf.gz 2005-04-27 11:02 3.0M
md5sum.txt 2005-04-27 11:02 2.5K
maf/ 2019-11-06 10:55 -